Nadakhan served as the manipulative Captain and Prince of the Djinn Realm, using his power to grant wishes that tricked the Ninja and his own crew. Flintlocke was the First Mate and a skilled marksman who initially demonstrated loyalty to Nadakhan but eventually betrayed him when his Captain's true villainy was revealed. Dogshank was the Boatswain and a massive, brute who, despite her fearsome appearance, held a unique code of honor in combat and eventually aided the Ninja. Doubloon, once a talkative master thief, was transformed by Nadakhan into a mute, two-faced fighter and served as the crew's main muscle during conflicts. Monkey Wretch was the mechanical expert who built and maintained the ship's air capabilities and vehicles, a role he earned after wishing to be the best mechanic. Clancee, a timid Serpentine Hybrid with a peg leg, served as the Head Ship's Mate, often considered the least valuable member, but provided crucial information to the Ninja later on. The primary conflict of the Season involved Nadakhan seeking vengeance against the Ninja for the destruction of his home realm, Djinjago, and trapping them in the Djinn Blade. Ultimately, Jay used his Final Wish to undo the entire Season's events, resulting in the Sky Pirates never being released and only Jay and Nya remembering the ordeal.